Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_06580 | Not Available | Positive | 1611943 - 1612188 | 9469.52 |
| dead/deah box helicase | DW869_06585 | Not Available | Negative | 1612264 - 1613568 | 48294.5 |
| hypothetical protein | DW869_06590 | Not Available | Negative | 1613772 - 1616228 | 89617.5 |
| endonuclease/exonuclease/phosphatase family protein | DW869_06595 | Not Available | Negative | 1616256 - 1617194 | 34976.7 |
| cysteine synthase a | DW869_06600 | Not Available | Positive | 1617340 - 1618290 | 33551.6 |
| trna 2-thiouridine(34) synthase mnma | DW869_06605 | Not Available | Positive | 1618297 - 1619361 | 39768.7 |
| dna-binding response regulator | DW869_06610 | Not Available | Negative | 1619358 - 1620008 | 24599.1 |
| Trna-val | Not Available | Not Available | Positive | 1620077 - 1620154 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1620193 - 1620267 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1620306 - 1620380 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

