Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DW869_06525 | Not Available | Positive | 1593665 - 1594255 | 23832.7 |
| fecr family protein | DW869_06530 | Not Available | Positive | 1594310 - 1595245 | 36575.9 |
| susc/raga family tonb-linked outer membrane protein | DW869_06535 | Not Available | Positive | 1595398 - 1598751 | 124291.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_06540 | Not Available | Positive | 1598765 - 1600306 | 59412.4 |
| duf4982 domain-containing protein | DW869_06545 | Not Available | Positive | 1600405 - 1602852 | 92761.4 |
| glycoside hydrolase | DW869_06550 | Not Available | Positive | 1602849 - 1604930 | 80552.9 |
| glycoside hydrolase family 2 protein | DW869_06555 | Not Available | Positive | 1604993 - 1607671 | 101266.0 |
| arylsulfatase | DW869_06560 | Not Available | Positive | 1607786 - 1609384 | 60935.1 |
| duf1566 domain-containing protein | DW869_06565 | Not Available | Positive | 1609668 - 1611218 | 54947.7 |
| hypothetical protein | DW869_06570 | Not Available | Negative | 1611251 - 1611460 | 7826.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

