Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 95 protein | DW869_00475 | Not Available | Negative | 145100 - 147502 | 88882.5 |
| hypothetical protein | DW869_00485 | Not Available | Positive | 150178 - 153645 | 133382.0 |
| iron-containing alcohol dehydrogenase | DW869_00505 | Not Available | Positive | 156426 - 157598 | 42892.9 |
| creatininase family protein | DW869_00510 | Not Available | Positive | 157598 - 158353 | 28428.1 |
| hypothetical protein | DW869_00515 | Not Available | Positive | 158562 - 158828 | 9793.29 |
| duf4221 domain-containing protein | DW869_00520 | Not Available | Positive | 158944 - 160098 | 45151.7 |
| duf1573 domain-containing protein | DW869_00525 | Not Available | Positive | 160095 - 160823 | 27262.7 |
| acyl-coa thioesterase | DW869_00530 | Not Available | Negative | 160888 - 161331 | 16882.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW869_00535 | Not Available | Positive | 161454 - 162731 | 47021.8 |
| sdr family nad(p)-dependent oxidoreductase | DW869_00540 | Not Available | Positive | 162742 - 163470 | 27029.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

