Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase c39 | DW869_05945 | Not Available | Positive | 1448426 - 1449013 | 23231.6 |
| hypothetical protein | DW869_05955 | Not Available | Negative | 1450812 - 1453121 | 87830.4 |
| radical sam protein | DW869_05960 | Not Available | Negative | 1453157 - 1454536 | 52552.6 |
| hypothetical protein | DW869_05965 | Not Available | Negative | 1454664 - 1454864 | 7208.15 |
| hypothetical protein | DW869_05970 | Not Available | Negative | 1455088 - 1455483 | 14991.0 |
| hypothetical protein | DW869_05975 | Not Available | Negative | 1455530 - 1455913 | 14548.6 |
| tetratricopeptide repeat protein | DW869_05985 | Not Available | Positive | 1456998 - 1458893 | 73961.7 |
| duf3244 domain-containing protein | DW869_05990 | Not Available | Positive | 1459057 - 1459470 | 15375.5 |
| hypothetical protein | DW869_05995 | Not Available | Positive | 1459505 - 1459744 | 9362.56 |
| hypothetical protein | DW869_06000 | Not Available | Positive | 1459777 - 1460691 | 35539.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

