Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-specific glutamate dehydrogenase | DW869_05790 | Not Available | Positive | 1411535 - 1412869 | 48972.7 |
| hypothetical protein | DW869_05795 | Not Available | Positive | 1413025 - 1414173 | 42380.7 |
| port family protein | DW869_05800 | Not Available | Positive | 1414182 - 1414958 | 29097.0 |
| duf4925 domain-containing protein | DW869_05805 | Not Available | Negative | 1415815 - 1417020 | 43424.5 |
| phosphoenolpyruvate synthase | DW869_05810 | Not Available | Negative | 1417130 - 1420087 | 112937.0 |
| nadp-specific glutamate dehydrogenase | DW869_05815 | Not Available | Positive | 1420322 - 1421659 | 48494.3 |
| hypothetical protein | DW869_05820 | Not Available | Positive | 1421821 - 1422216 | 15230.1 |
| duf3440 domain-containing protein | DW869_05825 | Not Available | Positive | 1422206 - 1423507 | 52313.9 |
| chromosome partitioning protein parb | DW869_05830 | Not Available | Positive | 1423504 - 1424016 | 19744.9 |
| hypothetical protein | DW869_05835 | Not Available | Positive | 1424044 - 1425828 | 65156.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

