Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | DW869_05740 | Not Available | Negative | 1395328 - 1398498 | 115826.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW869_05745 | Not Available | Negative | 1398580 - 1399602 | 37658.9 |
| tolc family protein | DW869_05750 | Not Available | Negative | 1399626 - 1400951 | 49635.6 |
| tetr/acrr family transcriptional regulator | DW869_05755 | Not Available | Negative | 1400988 - 1401641 | 25440.8 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW869_05760 | Not Available | Negative | 1401671 - 1402438 | 27537.9 |
| tolc family protein | DW869_05765 | Not Available | Negative | 1402462 - 1403847 | 50365.3 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DW869_05770 | Not Available | Negative | 1403859 - 1407077 | 116875.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW869_05775 | Not Available | Negative | 1407131 - 1408342 | 43695.5 |
| nadp-dependent malic enzyme | DW869_05780 | Not Available | Positive | 1408783 - 1411068 | 84255.2 |
| hypothetical protein | DW869_05785 | Not Available | Positive | 1411197 - 1411379 | 6713.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

