Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DW869_05680 | Not Available | Positive | 1380862 - 1381938 | 39686.0 |
| acrb/acrd/acrf family protein | DW869_05685 | Not Available | Positive | 1381958 - 1384993 | 112044.0 |
| tolc family protein | DW869_05690 | Not Available | Positive | 1384990 - 1386309 | 50562.7 |
| amino acid permease | DW869_05695 | Not Available | Positive | 1386398 - 1388056 | 59814.5 |
| hypothetical protein | DW869_05705 | Not Available | Positive | 1389410 - 1389838 | 15821.5 |
| hypothetical protein | DW869_05710 | Not Available | Positive | 1389926 - 1390222 | 11622.0 |
| mboat family protein | DW869_05720 | Not Available | Negative | 1391050 - 1392531 | 57220.6 |
| hypothetical protein | DW869_05725 | Not Available | Negative | 1392509 - 1393471 | 35950.6 |
| hypothetical protein | DW869_05730 | Not Available | Negative | 1393458 - 1394825 | 50814.9 |
| hypothetical protein | DW869_05735 | Not Available | Negative | 1394962 - 1395255 | 11252.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

