Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | DW869_05580 | Not Available | Negative | 1356767 - 1360564 | 143977.0 |
| phosphatidylserine decarboxylase proenzyme | DW869_05585 | Not Available | Positive | 1360756 - 1361442 | 25956.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DW869_05590 | Not Available | Positive | 1361454 - 1362161 | 26073.4 |
| duf4834 family protein | DW869_05595 | Not Available | Positive | 1362215 - 1362517 | 11511.5 |
| nucleoside deaminase | DW869_05600 | Not Available | Negative | 1362521 - 1362955 | 15697.1 |
| hypothetical protein | DW869_05605 | Not Available | Negative | 1362957 - 1363190 | 9401.63 |
| yran family protein | DW869_05610 | Not Available | Positive | 1363266 - 1363631 | 14153.8 |
| mmcq/yjbr family dna-binding protein | DW869_05615 | Not Available | Positive | 1363649 - 1364005 | 13937.7 |
| biotin--[acetyl-coa-carboxylase] ligase | DW869_05620 | Not Available | Positive | 1363989 - 1364756 | 29241.9 |
| peptidase s41 | DW869_05625 | Not Available | Negative | 1364753 - 1366192 | 54094.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

