Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_05480 | Not Available | Negative | 1340234 - 1340488 | 9646.16 |
| adp-ribosylglycohydrolase family protein | DW869_05485 | Not Available | Negative | 1340638 - 1341567 | 35011.2 |
| hypothetical protein | DW869_05490 | Not Available | Negative | 1341808 - 1342248 | 16632.8 |
| hypothetical protein | DW869_05495 | Not Available | Negative | 1342560 - 1343546 | 38768.2 |
| dna-binding protein | DW869_05500 | Not Available | Negative | 1343607 - 1343912 | 11714.2 |
| hypothetical protein | DW869_05505 | Not Available | Negative | 1344069 - 1344842 | 29961.8 |
| site-specific integrase | DW869_05510 | Not Available | Negative | 1344839 - 1346110 | 49929.3 |
| Trna-pro | Not Available | Not Available | Positive | 1346444 - 1346521 | Not Available |
| dna polymerase iv | DW869_05520 | Not Available | Positive | 1346783 - 1347877 | 41305.8 |
| adp-ribosylglycohydrolase | DW869_05525 | Not Available | Negative | 1347858 - 1348646 | 29815.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

