Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2075 domain-containing protein | DW869_05430 | Not Available | Negative | 1328959 - 1330377 | 53950.6 |
| hypothetical protein | DW869_05435 | Not Available | Positive | 1330475 - 1331161 | 25516.8 |
| duf3822 family protein | DW869_05440 | Not Available | Positive | 1331164 - 1331988 | 32356.9 |
| methyltransferase domain-containing protein | DW869_05445 | Not Available | Positive | 1331979 - 1332539 | 21359.3 |
| cardiolipin synthase | DW869_05450 | Not Available | Negative | 1332508 - 1333944 | 55420.2 |
| tonb-dependent receptor | DW869_05455 | Not Available | Negative | 1334037 - 1336934 | 108132.0 |
| hypothetical protein | DW869_05460 | Not Available | Negative | 1337015 - 1337419 | 15580.9 |
| 3-dehydroquinate synthase | DW869_05465 | Not Available | Positive | 1337517 - 1338578 | 39850.1 |
| arac family transcriptional regulator | DW869_05470 | Not Available | Positive | 1338852 - 1339712 | 34056.9 |
| hypothetical protein | DW869_05475 | Not Available | Negative | 1339718 - 1339999 | 11116.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

