Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m64 | DW869_05220 | Not Available | Positive | 1283789 - 1285174 | 52143.5 |
| gnat family n-acetyltransferase | DW869_05225 | Not Available | Positive | 1285209 - 1285745 | 21182.4 |
| hypothetical protein | DW869_05230 | Not Available | Negative | 1285656 - 1285871 | 8410.5 |
| biopolymer transporter exbd | DW869_05235 | Not Available | Negative | 1285928 - 1286392 | 17906.9 |
| biopolymer transporter exbd | DW869_05240 | Not Available | Negative | 1286392 - 1286982 | 22472.8 |
| hypothetical protein | DW869_05245 | Not Available | Negative | 1287026 - 1287487 | 16708.9 |
| mota/tolq/exbb proton channel family protein | DW869_05250 | Not Available | Negative | 1287495 - 1288268 | 27566.2 |
| Trna-ser | Not Available | Not Available | Positive | 1288356 - 1288443 | Not Available |
| tatd family deoxyribonuclease | DW869_05260 | Not Available | Negative | 1288611 - 1289384 | 29294.3 |
| polyprenyl synthetase family protein | DW869_05265 | Not Available | Negative | 1289386 - 1290363 | 36812.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

