Bacteroides ovatus strain AM40-4

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides ovatus strain AM40-4 is a Gram-negative, anaerobic, rod-shaped bacterium found in the gut of Homo sapiens. This strain is characterized by the presence of flagella, which may play a role in its motility within the complex gastrointestinal environment. It has a single replicon, indicating a streamlined genetic structure. As a member of the Bacteroides genus, B. ovatus is part of the diverse microbiota that contributes to the digestion of complex carbohydrates and the maintenance of gut health. The anaerobic nature of this bacterium allows it to thrive in the oxygen-depleted conditions of the intestinal tract, where it participates in various metabolic processes, including fermentation. The accession number QSGM00000000.1 serves as a reference for the genomic data associated with this strain, facilitating further research into its genetic makeup and potential functional traits. The presence of B. ovatus in the human gut highlights its ecological role in the microbiome, where it may influence host health through its involvement in metabolic processes and interactions with other microbial species. Understanding the specific functions and interactions of Bacteroides ovatus strain AM40-4 can provide insights into its contributions to gut health and the overall balance of the microbiome. Further studies could elucidate its role in nutrient absorption and its impact on host immune responses, emphasizing the importance of gut microbiota in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides ovatus
Strainstrain AM40-4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides ovatus strain AM40-4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides ovatus strain AM40-4 AM40-4.Scaf149, whole genome

Gene Summary

Adenine Count

1966041 bp

Thymine Count

1964600 bp

Guanine Count

1411060 bp

Cytosine Count

1398046 bp

Genome Length

6740416 bp

Protein-coding Genes

5060 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiol:disulfide interchange proteinDW890_04780Not AvailablePositive1290852 - 129291275787.4
pirin family proteinDW890_04785Not AvailableNegative1293018 - 129372226746.8
rna polymerase sigma-70 factorDW890_04790Not AvailablePositive1293918 - 129452023285.0
duf4974 domain-containing proteinDW890_04795Not AvailablePositive1294610 - 129559637685.0
susc/raga family tonb-linked outer membrane proteinDW890_04800Not AvailablePositive1295805 - 1299248127072.0
ragb/susd family nutrient uptake outer membrane proteinDW890_04805Not AvailablePositive1299272 - 130066352716.7
pkd domain-containing proteinDW890_04810Not AvailablePositive1300691 - 130265570388.5
sugar phosphate isomerase/epimeraseDW890_04815Not AvailablePositive1302662 - 130354333160.8
hypothetical proteinDW890_04820Not AvailablePositive1303545 - 130460339642.9
glycerophosphodiester phosphodiesteraseDW890_04825Not AvailablePositive1304624 - 130552333934.4

Displaying genes 961 – 970 of 5144 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.