Bacteroides ovatus strain AM40-4

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides ovatus strain AM40-4 is a Gram-negative, anaerobic, rod-shaped bacterium found in the gut of Homo sapiens. This strain is characterized by the presence of flagella, which may play a role in its motility within the complex gastrointestinal environment. It has a single replicon, indicating a streamlined genetic structure. As a member of the Bacteroides genus, B. ovatus is part of the diverse microbiota that contributes to the digestion of complex carbohydrates and the maintenance of gut health. The anaerobic nature of this bacterium allows it to thrive in the oxygen-depleted conditions of the intestinal tract, where it participates in various metabolic processes, including fermentation. The accession number QSGM00000000.1 serves as a reference for the genomic data associated with this strain, facilitating further research into its genetic makeup and potential functional traits. The presence of B. ovatus in the human gut highlights its ecological role in the microbiome, where it may influence host health through its involvement in metabolic processes and interactions with other microbial species. Understanding the specific functions and interactions of Bacteroides ovatus strain AM40-4 can provide insights into its contributions to gut health and the overall balance of the microbiome. Further studies could elucidate its role in nutrient absorption and its impact on host immune responses, emphasizing the importance of gut microbiota in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides ovatus
Strainstrain AM40-4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides ovatus strain AM40-4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides ovatus strain AM40-4 AM40-4.Scaf149, whole genome

Gene Summary

Adenine Count

1966041 bp

Thymine Count

1964600 bp

Guanine Count

1411060 bp

Cytosine Count

1398046 bp

Genome Length

6740416 bp

Protein-coding Genes

5060 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-n-arabinofuranosidaseDW890_18290Not AvailablePositive4900951 - 490192837281.5
alpha-glucuronidaseDW890_18295Not AvailablePositive4902094 - 490422980985.8
atp-binding cassette domain-containing proteinDW890_18300Not AvailablePositive4904337 - 490579155323.8
pas domain-containing sensor histidine kinaseDW890_18305Not AvailableNegative4905827 - 490763268722.4
sigma-70 family rna polymerase sigma factorDW890_18310Not AvailablePositive4908140 - 490864320120.1
duf4974 domain-containing proteinDW890_18315Not AvailablePositive4908710 - 490977740656.8
susc/raga family tonb-linked outer membrane proteinDW890_18320Not AvailablePositive4909797 - 4913393135322.0
ragb/susd family nutrient uptake outer membrane proteinDW890_18325Not AvailablePositive4913414 - 491484153592.9
duf5117 domain-containing proteinDW890_18330Not AvailablePositive4914861 - 491736595230.5
2,3-diphosphoglycerate-dependent phosphoglycerate mutaseDW890_18335Not AvailablePositive4917662 - 491840828775.1

Displaying genes 3601 – 3610 of 5144 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.