Bacteroides ovatus strain AM40-4

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides ovatus strain AM40-4 is a Gram-negative, anaerobic, rod-shaped bacterium found in the gut of Homo sapiens. This strain is characterized by the presence of flagella, which may play a role in its motility within the complex gastrointestinal environment. It has a single replicon, indicating a streamlined genetic structure. As a member of the Bacteroides genus, B. ovatus is part of the diverse microbiota that contributes to the digestion of complex carbohydrates and the maintenance of gut health. The anaerobic nature of this bacterium allows it to thrive in the oxygen-depleted conditions of the intestinal tract, where it participates in various metabolic processes, including fermentation. The accession number QSGM00000000.1 serves as a reference for the genomic data associated with this strain, facilitating further research into its genetic makeup and potential functional traits. The presence of B. ovatus in the human gut highlights its ecological role in the microbiome, where it may influence host health through its involvement in metabolic processes and interactions with other microbial species. Understanding the specific functions and interactions of Bacteroides ovatus strain AM40-4 can provide insights into its contributions to gut health and the overall balance of the microbiome. Further studies could elucidate its role in nutrient absorption and its impact on host immune responses, emphasizing the importance of gut microbiota in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides ovatus
Strainstrain AM40-4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides ovatus strain AM40-4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides ovatus strain AM40-4 AM40-4.Scaf149, whole genome

Gene Summary

Adenine Count

1966041 bp

Thymine Count

1964600 bp

Guanine Count

1411060 bp

Cytosine Count

1398046 bp

Genome Length

6740416 bp

Protein-coding Genes

5060 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerophosphodiester phosphodiesteraseDW890_18085Not AvailableNegative4836762 - 483772735530.2
pkd domain-containing proteinDW890_18090Not AvailableNegative4837798 - 483948359845.9
ragb/susd family nutrient uptake outer membrane proteinDW890_18095Not AvailableNegative4839498 - 484089252285.5
susc/raga family tonb-linked outer membrane proteinDW890_18100Not AvailableNegative4840903 - 4844316125242.0
duf4974 domain-containing proteinDW890_18105Not AvailableNegative4844443 - 484538436062.5
sigma-70 family rna polymerase sigma factorDW890_18110Not AvailableNegative4845534 - 484610022650.1
dna-binding proteinDW890_18115Not AvailablePositive4846484 - 484710723350.2
arac family transcriptional regulatorDW890_18120Not AvailablePositive4847365 - 484846542550.1
leucine-rich repeat domain-containing proteinDW890_18125Not AvailablePositive4848674 - 485035059196.0
dihydrofolate reductaseDW890_18130Not AvailablePositive4850858 - 485174232614.1

Displaying genes 3561 – 3570 of 5144 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.