Holdemanella biformis strain AM42-13AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Erysipelotrichaceae

Genus

Holdemanella

Description

Holdemanella biformis strain AM42-13AC is a microbial strain isolated from feces of Homo sapiens, indicating its presence in the human gastrointestinal tract. This strain is characterized by having a single replicon, which is a notable trait in microbial genetics as it may suggest a streamlined genomic organization. The presence of Holdemanella biformis in human feces suggests that it may play a role in the gut microbiome, contributing to the complex ecosystem of microorganisms that inhabit the human digestive system. While specific functional roles of this strain are not detailed, members of the genus Holdemanella are generally associated with carbohydrate metabolism and may assist in the breakdown of dietary fibers. The strain is cataloged under the accession number QSGD00000000.1, which provides a reference for researchers interested in studying its genetic and functional properties further. The ecological insight into Holdemanella biformis strain AM42-13AC highlights its potential significance in human health, particularly in relation to gut health and the microbiome's role in digestion and nutrient absorption. Understanding such strains can offer insights into maintaining a balanced gut microbiota, which is crucial for overall well-being.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyErysipelotrichaceae
GenusHoldemanella
SpeciesHoldemanella biformis
Strainstrain AM42-13AC

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Holdemanella biformis strain AM42-13AC AM42-13AC.Scaf145, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2426 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yqeg family had iiia-type phosphataseDW907_03630Not AvailablePositive706007 - 70653120008.5
ribosome biogenesis gtpase yqehDW907_03635Not AvailablePositive706524 - 70760340393.3
ribosome assembly rna-binding protein yhbyDW907_03640Not AvailablePositive707603 - 70789310827.3
nicotinate-nucleotide adenylyltransferaseDW907_03645Not AvailablePositive707890 - 70890639449.7
ribosome silencing factorDW907_03650Not AvailablePositive708909 - 70924712906.5
class i sam-dependent methyltransferaseDW907_03655Not AvailablePositive709237 - 70994727691.4
5'-methylthioadenosine/adenosylhomocysteine nucleosidaseDW907_03660Not AvailablePositive709944 - 71062424555.6
hypothetical proteinDW907_03665Not AvailablePositive710644 - 71111118498.5
dnad domain proteinDW907_03670Not AvailablePositive711111 - 71165020815.6
endonuclease iiiDW907_03675Not AvailablePositive711647 - 71227323949.8

Displaying genes 721 – 730 of 2515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.