Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DW921_00375 | Not Available | + | 75223 - 76230 | 39058.6 |
| glycosyltransferase family 2 protein | DW921_00380 | Not Available | + | 76389 - 77348 | 37649.1 |
| epsg family protein | DW921_00385 | Not Available | + | 77361 - 78407 | 40049.2 |
| glycosyltransferase | DW921_00390 | Not Available | + | 78414 - 79454 | 40207.1 |
| glycosyltransferase | DW921_00395 | Not Available | + | 79460 - 80266 | 31408.4 |
| chain-length determining protein | DW921_00400 | Not Available | + | 80275 - 81369 | 40299.6 |
| rpn family recombination-promoting nuclease/putative transposase | DW921_00405 | Not Available | + | 81752 - 82663 | 35321.8 |
| cobalamin biosynthesis protein cobd | DW921_00410 | Not Available | - | 82899 - 83849 | 35194.4 |
| pyridoxal phosphate-dependent class ii aminotransferase | DW921_00415 | Not Available | - | 83831 - 84844 | 38359.9 |
| cobyric acid synthase | DW921_00420 | Not Available | - | 84837 - 86327 | 54561.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
