Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DW921_00325 | Not Available | + | 63001 - 64425 | 53753.3 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DW921_00330 | Not Available | + | 64444 - 65637 | 43897.7 |
| Trna-gly | Not Available | Not Available | + | 65712 - 65784 | Not Available |
| hypothetical protein | DW921_00340 | Not Available | + | 66334 - 66558 | 8737.81 |
| capsule biosynthesis protein | DW921_00345 | Not Available | + | 66551 - 69070 | 93355.8 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DW921_00350 | Not Available | + | 69339 - 70475 | 42212.3 |
| polysaccharide pyruvyl transferase family protein | DW921_00355 | Not Available | + | 70490 - 71530 | 39893.4 |
| glycosyltransferase | DW921_00360 | Not Available | + | 71530 - 72708 | 46192.8 |
| sugar transporter | DW921_00365 | Not Available | + | 72693 - 74234 | 59121.1 |
| hypothetical protein | DW921_00370 | Not Available | + | 74231 - 75226 | 39255.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
