Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4738 domain-containing protein | DW921_00275 | Not Available | - | 53490 - 54314 | 31062.1 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DW921_00280 | Not Available | - | 54311 - 55624 | 48414.0 |
| spor domain-containing protein | DW921_00285 | Not Available | + | 55740 - 56897 | 42605.0 |
| fha domain-containing protein | DW921_00290 | Not Available | + | 56921 - 57469 | 20690.6 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DW921_00295 | Not Available | + | 57457 - 57966 | 19589.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DW921_00300 | Not Available | + | 57971 - 59008 | 37765.8 |
| adenosylcobinamide-gdp ribazoletransferase | DW921_00305 | Not Available | + | 59012 - 59767 | 28314.7 |
| alpha-ribazole phosphatase | DW921_00310 | Not Available | + | 59764 - 60291 | 19720.2 |
| 4fe-4s dicluster domain-containing protein | DW921_00315 | Not Available | + | 60434 - 61927 | 55286.7 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DW921_00320 | Not Available | + | 61940 - 62974 | 38365.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
