Phocaeicola coprophilus strain AM42-38

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola coprophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola coprophilus strain AM42-38

Accession NumberQSFT00000000.1

Gene Summary

Adenine Count

960006 bp

Thymine Count

941783 bp

Guanine Count

792831 bp

Cytosine Count

797910 bp

Genome Length

3493311 bp

Protein-coding Genes

2820 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf3805 domain-containing proteinDW921_02990Not Available+638835 - 63965931657.2
abc transporter atp-binding proteinDW921_02995Not Available+639738 - 64160372448.7
hypothetical proteinDW921_03000Not Available+641833 - 64254025859.1
mate family efflux transporterDW921_03005Not Available-642512 - 64386449357.6
ghkl domain-containing proteinDW921_03010Not Available-643861 - 64514448470.1
sigma-54-dependent fis family transcriptional regulatorDW921_03015Not Available-645141 - 64650851476.2
tolc family proteinDW921_03020Not Available+646703 - 64816056081.6
efflux rnd transporter periplasmic adaptor subunitDW921_03025Not Available+648187 - 64943748083.8
abc transporter permeaseDW921_03030Not Available+649463 - 65183890800.5
abc transporter permeaseDW921_03035Not Available+651865 - 65427090191.0

Displaying genes 601 – 610 of 2926 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites