Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | DW921_00225 | Not Available | - | 39173 - 39886 | 26734.2 |
| endopeptidase la | DW921_00230 | Not Available | + | 40089 - 42572 | 93409.3 |
| trna guanosine(34) transglycosylase tgt | DW921_00235 | Not Available | + | 42574 - 43704 | 42687.5 |
| yjgp/yjgq family permease | DW921_00240 | Not Available | + | 43742 - 44851 | 42911.9 |
| hypothetical protein | DW921_00245 | Not Available | - | 45131 - 47242 | 77182.2 |
| alcohol dehydrogenase | DW921_00250 | Not Available | - | 47828 - 48889 | 38334.2 |
| hypothetical protein | DW921_00255 | Not Available | + | 49068 - 49988 | 34496.7 |
| hypothetical protein | DW921_00260 | Not Available | - | 50075 - 50569 | 18377.9 |
| phosphoserine phosphatase serb | DW921_00265 | Not Available | + | 50897 - 52129 | 46103.2 |
| dead/deah box helicase | DW921_00270 | Not Available | + | 52159 - 53430 | 47103.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
