Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DW921_02790 | Not Available | + | 590403 - 591665 | 48348.0 |
| abc transporter atp-binding protein | DW921_02795 | Not Available | + | 591710 - 592390 | 25120.2 |
| abc transporter permease | DW921_02800 | Not Available | + | 592403 - 594745 | 88255.1 |
| hypothetical protein | DW921_02805 | Not Available | + | 594779 - 596365 | 61434.5 |
| abc transporter permease | DW921_02810 | Not Available | + | 596406 - 598760 | 88140.9 |
| sigma-54-dependent fis family transcriptional regulator | DW921_02815 | Not Available | + | 598914 - 600278 | 50123.4 |
| atp-binding protein | DW921_02820 | Not Available | + | 600280 - 601524 | 47303.7 |
| dna-binding response regulator | DW921_02825 | Not Available | - | 601746 - 602483 | 28315.6 |
| sensor histidine kinase | DW921_02830 | Not Available | - | 602498 - 603544 | 40584.1 |
| abc transporter permease | DW921_02835 | Not Available | - | 603709 - 604929 | 44153.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
