Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | DW921_02740 | Not Available | + | 579814 - 581265 | 54995.4 |
| nitronate monooxygenase | DW921_02745 | Not Available | - | 581400 - 582347 | 34544.9 |
| anaerobic c4-dicarboxylate transporter | DW921_02750 | Not Available | + | 582454 - 583770 | 46730.2 |
| hypothetical protein | DW921_02755 | Not Available | - | 583755 - 583955 | 7713.33 |
| gnat family n-acetyltransferase | DW921_02760 | Not Available | + | 583954 - 585489 | 59294.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DW921_02765 | Not Available | - | 585648 - 586217 | 22015.9 |
| glucose-1-phosphate thymidylyltransferase | DW921_02770 | Not Available | - | 586222 - 587127 | 33545.4 |
| hypothetical protein | DW921_02775 | Not Available | + | 587261 - 587614 | 12780.2 |
| glutathionylspermidine synthase family protein | DW921_02780 | Not Available | + | 587629 - 588756 | 43085.6 |
| tolc family protein | DW921_02785 | Not Available | + | 589040 - 590389 | 50669.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
