Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | DW921_02690 | Not Available | + | 568394 - 568789 | 15176.8 |
| membrane protein insertion efficiency factor yidd | DW921_02695 | Not Available | + | 568786 - 569007 | 8471.57 |
| deoxyribonuclease | DW921_02700 | Not Available | + | 569023 - 569667 | 24337.2 |
| tyrosine--trna ligase | DW921_02705 | Not Available | + | 569761 - 571053 | 48349.1 |
| tonb-dependent receptor | DW921_02710 | Not Available | + | 571696 - 574662 | 109988.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW921_02715 | Not Available | + | 574760 - 575049 | 10912.5 |
| long-chain fatty acid--coa ligase | DW921_02720 | Not Available | - | 575121 - 576782 | 63041.3 |
| duf4286 family protein | DW921_02725 | Not Available | + | 576929 - 577234 | 11947.3 |
| crossover junction endodeoxyribonuclease ruvc | DW921_02730 | Not Available | + | 577231 - 577800 | 20866.9 |
| type i pullulanase | DW921_02735 | Not Available | + | 577810 - 579804 | 74147.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
