Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DW921_02640 | Not Available | + | 560044 - 560910 | 32113.9 |
| duf3098 domain-containing protein | DW921_02645 | Not Available | + | 560937 - 561206 | 9936.28 |
| undecaprenyl-diphosphate phosphatase | DW921_02650 | Not Available | + | 561203 - 562006 | 28835.1 |
| trna pseudouridine(55) synthase trub | DW921_02655 | Not Available | + | 562070 - 562774 | 26643.2 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DW921_02660 | Not Available | + | 562792 - 563847 | 40354.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DW921_02665 | Not Available | + | 563858 - 564319 | 17418.1 |
| methionine adenosyltransferase | DW921_02670 | Not Available | + | 564558 - 565853 | 47766.9 |
| tigr00730 family rossman fold protein | DW921_02675 | Not Available | + | 566035 - 566622 | 21731.5 |
| duf4271 domain-containing protein | DW921_02680 | Not Available | + | 566619 - 567428 | 31676.2 |
| uroporphyrinogen-iii synthase | DW921_02685 | Not Available | + | 567433 - 568179 | 28300.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
