Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | DW921_02590 | Not Available | - | 546618 - 547757 | 43972.7 |
| non-canonical purine ntp diphosphatase | DW921_02595 | Not Available | - | 547816 - 548394 | 21395.3 |
| yitt family protein | DW921_02600 | Not Available | - | 548405 - 549301 | 33334.4 |
| leucine--trna ligase | DW921_02605 | Not Available | - | 549306 - 552140 | 107905.0 |
| duf4982 domain-containing protein | DW921_02610 | Not Available | + | 552509 - 555220 | 102267.0 |
| acetyl-coa hydrolase/transferase family protein | DW921_02615 | Not Available | - | 555308 - 556804 | 54071.9 |
| hypothetical protein | DW921_02620 | Not Available | - | 556847 - 557215 | 13755.7 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DW921_02625 | Not Available | + | 557341 - 558708 | 51772.9 |
| pspc domain-containing protein | DW921_02630 | Not Available | - | 558795 - 558989 | 7475.3 |
| class i sam-dependent methyltransferase | DW921_02635 | Not Available | + | 559145 - 560047 | 34748.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
