Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | DW921_00175 | Not Available | - | 30988 - 31248 | 9758.97 |
| cina family protein | DW921_00180 | Not Available | - | 31352 - 31852 | 17767.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DW921_00185 | Not Available | - | 31872 - 32897 | 36964.4 |
| type i methionyl aminopeptidase | DW921_00190 | Not Available | - | 32922 - 33776 | 31581.8 |
| hypothetical protein | DW921_00195 | Not Available | + | 34018 - 34236 | 8300.68 |
| methyltransferase | DW921_00200 | Not Available | - | 34464 - 35135 | 24496.7 |
| cof-type had-iib family hydrolase | DW921_00205 | Not Available | + | 35237 - 36046 | 30552.3 |
| ferredoxin | DW921_00210 | Not Available | - | 36033 - 36566 | 19391.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DW921_00215 | Not Available | - | 36726 - 37913 | 44264.2 |
| diacylglycerol kinase family lipid kinase | DW921_00220 | Not Available | + | 38125 - 39159 | 37907.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
