Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DW921_02390 | Not Available | - | 495942 - 497795 | 67195.8 |
| Trna-arg | Not Available | Not Available | + | 497960 - 498034 | Not Available |
| glycine c-acetyltransferase | DW921_02400 | Not Available | - | 498120 - 499310 | 43612.4 |
| nad-dependent epimerase/dehydratase family protein | DW921_02405 | Not Available | + | 499446 - 500402 | 35416.4 |
| lysine exporter lyso family protein | DW921_02410 | Not Available | - | 500546 - 501466 | 32934.2 |
| protein translocase subunit secdf | DW921_02415 | Not Available | - | 501631 - 504597 | 108281.0 |
| m3 family peptidase | DW921_02420 | Not Available | - | 504735 - 506828 | 79295.0 |
| endonuclease | DW921_02425 | Not Available | - | 506848 - 507918 | 40146.8 |
| rhomboid family intramembrane serine protease | DW921_02430 | Not Available | - | 507928 - 508815 | 33760.5 |
| rhomboid family intramembrane serine protease | DW921_02435 | Not Available | - | 508796 - 509476 | 25509.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
