Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DW921_02340 | Not Available | + | 485495 - 485998 | 19828.5 |
| arginine--trna ligase | DW921_02345 | Not Available | + | 486574 - 488391 | 68261.2 |
| ribonuclease h | DW921_02350 | Not Available | + | 488391 - 489011 | 23371.0 |
| alkaline phosphatase family protein | DW921_02355 | Not Available | + | 489093 - 490916 | 68547.3 |
| proton-conducting membrane transporter | DW921_02360 | Not Available | - | 490924 - 491574 | 23968.9 |
| hypothetical protein | DW921_02365 | Not Available | - | 491598 - 491975 | 14480.3 |
| phosphoenolpyruvate carboxykinase (atp) | DW921_02370 | Not Available | - | 492103 - 493707 | 59275.3 |
| hypothetical protein | DW921_02375 | Not Available | + | 493926 - 494186 | 10264.6 |
| uracil phosphoribosyltransferase | DW921_02380 | Not Available | + | 494193 - 494846 | 24391.4 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DW921_02385 | Not Available | - | 494928 - 495938 | 36648.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
