Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase | DW921_02290 | Not Available | + | 473369 - 475282 | 72138.0 |
| tigr00341 family protein | DW921_02295 | Not Available | - | 475371 - 476732 | 50657.4 |
| polysaccharide biosynthesis protein | DW921_02300 | Not Available | - | 476748 - 478238 | 56256.2 |
| holliday junction branch migration dna helicase ruvb | DW921_02305 | Not Available | - | 478316 - 479341 | 37804.4 |
| 4fe-4s dicluster domain-containing protein | DW921_02310 | Not Available | + | 479418 - 480203 | 28461.2 |
| trna 2-thiouridine(34) synthase mnma | DW921_02315 | Not Available | + | 480211 - 481347 | 42924.7 |
| sis domain-containing protein | DW921_02320 | Not Available | - | 481452 - 482054 | 21669.4 |
| tigr00730 family rossman fold protein | DW921_02325 | Not Available | - | 482079 - 482612 | 19584.6 |
| insulinase family protein | DW921_02330 | Not Available | + | 482726 - 483949 | 46670.1 |
| arac family transcriptional regulator | DW921_02335 | Not Available | + | 484962 - 485327 | 13987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
