Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | DW921_02240 | Not Available | - | 462255 - 464717 | 93822.9 |
| gfo/idh/moca family oxidoreductase | DW921_02245 | Not Available | + | 464811 - 465788 | 36522.8 |
| porin family protein | DW921_02250 | Not Available | - | 465845 - 466435 | 20827.4 |
| Trna-met | Not Available | Not Available | + | 466944 - 467020 | Not Available |
| calcium-translocating p-type atpase, pmca-type | DW921_02260 | Not Available | + | 467125 - 469803 | 98609.3 |
| had family phosphatase | DW921_02265 | Not Available | + | 469803 - 470417 | 23360.8 |
| bifunctional riboflavin kinase/fad synthetase | DW921_02270 | Not Available | + | 470422 - 471345 | 35133.6 |
| cpbp family intramembrane metalloprotease | DW921_02275 | Not Available | + | 471566 - 472390 | 30215.8 |
| duf2975 domain-containing protein | DW921_02280 | Not Available | + | 472402 - 473052 | 24257.9 |
| transcriptional regulator | DW921_02285 | Not Available | + | 473064 - 473279 | 7901.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
