Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | DW921_02190 | Not Available | - | 451067 - 451951 | 34169.2 |
| 30s ribosomal protein s21 | DW921_02195 | Not Available | - | 452027 - 452218 | 7581.51 |
| aminopeptidase p family protein | DW921_02200 | Not Available | + | 452375 - 454156 | 67004.3 |
| gamma carbonic anhydrase family protein | DW921_02205 | Not Available | + | 454197 - 454727 | 19060.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | DW921_02210 | Not Available | - | 454791 - 456011 | 46419.9 |
| glutamate--trna ligase | DW921_02215 | Not Available | - | 456023 - 457540 | 58044.4 |
| hdig domain-containing protein | DW921_02220 | Not Available | + | 457625 - 459682 | 78533.4 |
| anaerobic sulfatase-maturation protein | DW921_02225 | Not Available | - | 459769 - 460995 | 47454.8 |
| low molecular weight phosphotyrosine protein phosphatase | DW921_02230 | Not Available | - | 461007 - 461480 | 17983.3 |
| phosphatase | DW921_02235 | Not Available | - | 461516 - 462229 | 26253.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
