Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 protein | DW921_02085 | Not Available | - | 424256 - 426892 | 98913.4 |
| cytochrome c biosynthesis protein | DW921_02090 | Not Available | - | 426927 - 428420 | 55968.0 |
| hypothetical protein | DW921_02095 | Not Available | - | 428395 - 429873 | 58409.2 |
| ragb/susd family nutrient uptake outer membrane protein | DW921_02100 | Not Available | - | 430008 - 431639 | 61390.8 |
| tonb-dependent receptor | DW921_02105 | Not Available | - | 431665 - 434733 | 112598.0 |
| dna-directed rna polymerase subunit beta' | DW921_02115 | Not Available | - | 437609 - 441895 | 158874.0 |
| dna-directed rna polymerase subunit beta | DW921_02120 | Not Available | - | 441989 - 445801 | 142611.0 |
| 50s ribosomal protein l7/l12 | DW921_02125 | Not Available | - | 445941 - 446318 | 12749.3 |
| 50s ribosomal protein l10 | DW921_02130 | Not Available | - | 446398 - 446913 | 18447.4 |
| 50s ribosomal protein l1 | DW921_02135 | Not Available | - | 446928 - 447626 | 24920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
