Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | DW921_00125 | Not Available | - | 22549 - 23547 | 37193.8 |
| hypothetical protein | DW921_00130 | Not Available | - | 23566 - 24612 | 39614.5 |
| duf58 domain-containing protein | DW921_00135 | Not Available | - | 24674 - 25543 | 33660.4 |
| atpase | DW921_00140 | Not Available | - | 25568 - 26563 | 37305.5 |
| hypothetical protein | DW921_00145 | Not Available | - | 26768 - 27925 | 42981.3 |
| hu family dna-binding protein | DW921_00150 | Not Available | - | 27922 - 28209 | 10711.1 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DW921_00155 | Not Available | - | 28229 - 29527 | 50099.9 |
| signal recognition particle-docking protein ftsy | DW921_00160 | Not Available | - | 29524 - 30489 | 34838.1 |
| duf4295 domain-containing protein | DW921_00165 | Not Available | - | 30615 - 30770 | 5799.13 |
| 50s ribosomal protein l33 | DW921_00170 | Not Available | - | 30780 - 30968 | 7220.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
