Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | DW921_01835 | Not Available | + | 387844 - 388479 | 23171.1 |
| srpbcc family protein | DW921_01840 | Not Available | + | 388584 - 389012 | 16180.9 |
| argininosuccinate lyase | DW921_01845 | Not Available | + | 389038 - 390378 | 50632.3 |
| Trna-gly | Not Available | Not Available | + | 390456 - 390531 | Not Available |
| Trna-leu | Not Available | Not Available | + | 390541 - 390629 | Not Available |
| wg repeat-containing protein | DW921_01860 | Not Available | - | 390882 - 391955 | 41403.8 |
| Trna-leu | Not Available | Not Available | + | 392098 - 392184 | Not Available |
| mannose-1-phosphate guanylyltransferase | DW921_01870 | Not Available | + | 392370 - 393413 | 39969.6 |
| tonb-dependent receptor | DW921_01875 | Not Available | - | 393446 - 395821 | 88757.2 |
| hit family protein | DW921_01880 | Not Available | - | 395905 - 396312 | 15101.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
