Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | DW921_01735 | Not Available | + | 370255 - 370764 | 17722.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DW921_01740 | Not Available | + | 370764 - 372620 | 68617.1 |
| s41 family peptidase | DW921_01745 | Not Available | - | 372768 - 374465 | 62983.3 |
| adenosine kinase | DW921_01750 | Not Available | - | 374510 - 375496 | 35569.9 |
| Trna-asn | Not Available | Not Available | + | 375576 - 375649 | Not Available |
| Trna-asn | Not Available | Not Available | + | 375676 - 375749 | Not Available |
| Trna-asn | Not Available | Not Available | + | 375776 - 375852 | Not Available |
| Trna-asn | Not Available | Not Available | + | 375875 - 375948 | Not Available |
| magnesium transporter cora family protein | DW921_01775 | Not Available | + | 376036 - 376962 | 35969.6 |
| hypothetical protein | DW921_01780 | Not Available | + | 376964 - 377428 | 18065.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
