Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW921_01685 | Not Available | + | 360074 - 361357 | 47029.0 |
| rubredoxin | DW921_01690 | Not Available | - | 361421 - 361585 | 5950.9 |
| nad-dependent deacylase | DW921_01695 | Not Available | - | 361652 - 362359 | 26062.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW921_01700 | Not Available | + | 362491 - 363075 | 21386.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW921_01705 | Not Available | + | 363100 - 363951 | 30766.8 |
| na/pi cotransporter family protein | DW921_01710 | Not Available | - | 364059 - 365753 | 63257.3 |
| nucleoside kinase | DW921_01715 | Not Available | + | 365845 - 367509 | 63792.2 |
| rna polymerase sigma-54 factor | DW921_01720 | Not Available | + | 367653 - 369131 | 56284.1 |
| hypothetical protein | DW921_01725 | Not Available | + | 369223 - 369819 | 22532.1 |
| glycine cleavage system protein gcvh | DW921_01730 | Not Available | + | 369853 - 370233 | 14249.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
