Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_01585 | Not Available | + | 337881 - 338297 | 15501.7 |
| hypothetical protein | DW921_01590 | Not Available | - | 338346 - 338831 | 18655.6 |
| m48 family peptidase | DW921_01595 | Not Available | - | 338865 - 339569 | 26788.9 |
| hypothetical protein | DW921_01600 | Not Available | - | 339757 - 340221 | 18038.8 |
| rna polymerase sigma factor | DW921_01605 | Not Available | - | 340211 - 340720 | 20161.2 |
| acetylglutamate kinase | DW921_01610 | Not Available | - | 340791 - 341567 | 27447.4 |
| biosynthetic arginine decarboxylase | DW921_01615 | Not Available | - | 341673 - 343565 | 71564.1 |
| shikimate kinase | DW921_01620 | Not Available | - | 343608 - 344162 | 20795.1 |
| type i dna topoisomerase | DW921_01625 | Not Available | - | 344159 - 346492 | 87897.1 |
| tonb-dependent receptor | DW921_01630 | Not Available | - | 346682 - 348355 | 63109.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
