Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cvpa family protein | DW921_01535 | Not Available | - | 322807 - 323340 | 19003.8 |
| translation initiation factor if-2 | DW921_01540 | Not Available | - | 323449 - 326421 | 109437.0 |
| transcription termination/antitermination protein nusa | DW921_01545 | Not Available | - | 326524 - 327780 | 47427.5 |
| ribosome assembly cofactor rimp | DW921_01550 | Not Available | - | 327784 - 328251 | 17994.2 |
| penicillin-binding protein | DW921_01555 | Not Available | + | 328476 - 330407 | 73219.3 |
| yjbq family protein | DW921_01560 | Not Available | - | 330394 - 330807 | 15626.8 |
| duf5110 domain-containing protein | DW921_01565 | Not Available | - | 330887 - 332833 | 73987.9 |
| hypothetical protein | DW921_01570 | Not Available | - | 333521 - 333961 | 17274.7 |
| glycoside hydrolase family 125 protein | DW921_01575 | Not Available | - | 334051 - 335511 | 55308.8 |
| hypothetical protein | DW921_01580 | Not Available | - | 335529 - 337748 | 83487.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
