Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starch-binding outer membrane lipoprotein susd | DW921_01485 | Not Available | + | 310287 - 311954 | 62780.0 |
| hypothetical protein | DW921_01490 | Not Available | + | 312124 - 313467 | 49643.8 |
| duf3109 family protein | DW921_01495 | Not Available | - | 313606 - 314187 | 22023.3 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DW921_01500 | Not Available | - | 314323 - 315840 | 55718.9 |
| gtp-binding protein | DW921_01505 | Not Available | + | 316028 - 317263 | 47101.0 |
| ribonuclease hii | DW921_01510 | Not Available | - | 317352 - 317954 | 22782.3 |
| cysteine desulfurase | DW921_01515 | Not Available | - | 317983 - 319200 | 44918.7 |
| fe-s cluster assembly protein sufd | DW921_01520 | Not Available | - | 319243 - 320595 | 50974.9 |
| fe-s cluster assembly atpase sufc | DW921_01525 | Not Available | - | 320592 - 321344 | 27763.8 |
| fe-s cluster assembly protein sufb | DW921_01530 | Not Available | - | 321383 - 322834 | 54006.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
