Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_01435 | Not Available | - | 290263 - 292467 | 82503.3 |
| hypothetical protein | DW921_01440 | Not Available | - | 292614 - 293525 | 32839.8 |
| hypothetical protein | DW921_01445 | Not Available | - | 293649 - 295499 | 67670.6 |
| hypothetical protein | DW921_01450 | Not Available | - | 295517 - 295963 | 16460.0 |
| hypothetical protein | DW921_01455 | Not Available | - | 295976 - 297835 | 68964.4 |
| 4-alpha-glucanotransferase | DW921_01460 | Not Available | + | 298164 - 300884 | 106022.0 |
| hypothetical protein | DW921_01465 | Not Available | - | 301183 - 302787 | 62811.7 |
| alpha-amylase | DW921_01470 | Not Available | + | 303020 - 304894 | 71355.5 |
| glycoside hydrolase family 97 protein | DW921_01475 | Not Available | + | 305005 - 307185 | 82729.3 |
| tonb-dependent receptor | DW921_01480 | Not Available | + | 307274 - 310255 | 109659.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
