Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_14835 | Not Available | + | 3443622 - 3447101 | 136873.0 |
| hypothetical protein | DW921_14840 | Not Available | + | 3447461 - 3447988 | 20179.7 |
| glycine-rich domain-containing protein-like | DW921_14845 | Not Available | + | 3447985 - 3448365 | 14787.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DW921_14850 | Not Available | - | 3448688 - 3449983 | 48034.4 |
| dihydropteroate synthase | DW921_14855 | Not Available | + | 3450101 - 3450985 | 32992.8 |
| tigr00159 family protein | DW921_14860 | Not Available | + | 3450988 - 3451761 | 28804.9 |
| Trna-ser | Not Available | Not Available | + | 3451863 - 3451953 | Not Available |
| macrolide efflux mfs transporter mef(en2) | DW921_14870 | Not Available | + | 3452277 - 3453482 | 44135.4 |
| susc/raga family tonb-linked outer membrane protein | DW921_14875 | Not Available | - | 3453606 - 3455798 | 80821.4 |
| fecr family protein | DW921_14880 | Not Available | - | 3456070 - 3457065 | 37588.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
