Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4292 domain-containing protein | DW921_01385 | Not Available | - | 279348 - 280184 | 31146.1 |
| hypothetical protein | DW921_01390 | Not Available | - | 280181 - 281971 | 69501.6 |
| dutp diphosphatase | DW921_01395 | Not Available | - | 281984 - 282418 | 15752.1 |
| dntp triphosphohydrolase | DW921_01400 | Not Available | + | 282734 - 284065 | 50482.5 |
| gnat family n-acetyltransferase | DW921_01405 | Not Available | - | 284389 - 285432 | 39730.5 |
| duf2156 domain-containing protein | DW921_01410 | Not Available | - | 285453 - 286382 | 35527.1 |
| lrgb family protein | DW921_01415 | Not Available | - | 286396 - 287091 | 24413.1 |
| cida/lrga family protein | DW921_01420 | Not Available | - | 287072 - 287422 | 13073.8 |
| phosphate acetyltransferase | DW921_01425 | Not Available | + | 287626 - 288645 | 36117.0 |
| acetate kinase | DW921_01430 | Not Available | + | 288675 - 289877 | 44012.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
