Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DW921_14570 | Not Available | - | 3384814 - 3386007 | 43391.1 |
| bax inhibitor (bi)-1/ycca family protein | DW921_14575 | Not Available | - | 3386055 - 3386756 | 26080.8 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DW921_14580 | Not Available | - | 3386771 - 3387985 | 45021.3 |
| lptf/lptg family permease | DW921_14585 | Not Available | - | 3388003 - 3389898 | 72310.6 |
| hypothetical protein | DW921_14590 | Not Available | - | 3389975 - 3390355 | 14793.5 |
| Trna-met | Not Available | Not Available | + | 3390578 - 3390654 | Not Available |
| Trna-met | Not Available | Not Available | + | 3390710 - 3390783 | Not Available |
| transposase | DW921_14605 | Not Available | - | 3390936 - 3391049 | 4302.16 |
| hypothetical protein | DW921_14615 | Not Available | - | 3391348 - 3391614 | 10288.5 |
| hypothetical protein | DW921_14620 | Not Available | + | 3391666 - 3392301 | 23999.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
