Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_14420 | Not Available | - | 3351423 - 3351692 | 10393.3 |
| Trna-asp | Not Available | Not Available | + | 3352766 - 3352842 | Not Available |
| phosphopyruvate hydratase | DW921_14430 | Not Available | - | 3353077 - 3354360 | 46276.2 |
| rubrerythrin family protein | DW921_14435 | Not Available | - | 3354553 - 3355131 | 21637.5 |
| stas domain-containing protein | DW921_14440 | Not Available | + | 3355347 - 3357032 | 60917.0 |
| radical sam protein | DW921_14445 | Not Available | - | 3357116 - 3357895 | 29434.2 |
| helix-hairpin-helix domain-containing protein | DW921_14450 | Not Available | - | 3357947 - 3359992 | 79964.3 |
| duf4294 domain-containing protein | DW921_14455 | Not Available | + | 3360177 - 3360683 | 19773.4 |
| trmh family rna methyltransferase | DW921_14460 | Not Available | - | 3360678 - 3361220 | 20354.7 |
| hypothetical protein | DW921_14465 | Not Available | + | 3361489 - 3361683 | 7852.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
