Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent oxidoreductase | DW921_14365 | Not Available | - | 3333476 - 3334216 | 28020.5 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DW921_14370 | Not Available | + | 3334594 - 3337137 | 96339.6 |
| dihydroneopterin aldolase | DW921_14375 | Not Available | + | 3337253 - 3337621 | 13883.7 |
| cytidine deaminase | DW921_14380 | Not Available | + | 3337698 - 3338186 | 17879.2 |
| beta-galactosidase | DW921_14385 | Not Available | - | 3338214 - 3340373 | 83192.4 |
| hypothetical protein | DW921_14390 | Not Available | - | 3340477 - 3341865 | 53146.4 |
| alpha-n-acetylglucosaminidase | DW921_14395 | Not Available | - | 3341922 - 3344435 | 96235.2 |
| hypothetical protein | DW921_14400 | Not Available | - | 3344490 - 3344957 | 16855.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW921_14405 | Not Available | - | 3344972 - 3346870 | 71227.1 |
| dna mismatch repair protein muts | DW921_14415 | Not Available | + | 3348356 - 3350959 | 98034.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
