Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | DW921_01335 | Not Available | + | 267716 - 269128 | 51573.9 |
| helix-hairpin-helix domain-containing protein | DW921_01340 | Not Available | - | 269132 - 270037 | 35058.6 |
| sodium-dependent transporter | DW921_01345 | Not Available | - | 270048 - 271418 | 49192.1 |
| hypothetical protein | DW921_01350 | Not Available | + | 271512 - 271904 | 15155.8 |
| rna polymerase sigma factor | DW921_01355 | Not Available | - | 272224 - 272727 | 19782.6 |
| cyth domain-containing protein | DW921_01360 | Not Available | - | 272885 - 273355 | 18197.4 |
| peptide chain release factor 2 | DW921_01365 | Not Available | - | 273670 - 274785 | 42691.2 |
| long-chain fatty acid--coa ligase | DW921_01370 | Not Available | - | 274864 - 276669 | 68538.5 |
| m20/m25/m40 family metallo-hydrolase | DW921_01375 | Not Available | + | 276881 - 277945 | 38966.3 |
| peptidase m23 | DW921_01380 | Not Available | - | 278029 - 279351 | 50605.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
