Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | DW921_14125 | Not Available | - | 3281507 - 3282373 | 32816.9 |
| gntr family transcriptional regulator | DW921_14130 | Not Available | + | 3282559 - 3283395 | 31958.8 |
| acrb/acrd/acrf family protein | DW921_14145 | Not Available | - | 3286041 - 3289232 | 116690.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW921_14150 | Not Available | - | 3289246 - 3290319 | 38677.2 |
| arac family transcriptional regulator | DW921_14155 | Not Available | + | 3290547 - 3291470 | 36233.9 |
| tolc family protein | DW921_14160 | Not Available | - | 3291601 - 3292932 | 49954.7 |
| efflux rnd transporter periplasmic adaptor subunit | DW921_14165 | Not Available | - | 3292936 - 3294033 | 40052.3 |
| abc transporter permease | DW921_14170 | Not Available | - | 3294100 - 3295344 | 45777.9 |
| abc transporter permease | DW921_14175 | Not Available | - | 3295347 - 3296597 | 46191.2 |
| abc transporter atp-binding protein | DW921_14180 | Not Available | - | 3296606 - 3297325 | 26791.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
