Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_13975 | Not Available | + | 3259807 - 3260010 | 7943.69 |
| duf4199 domain-containing protein | DW921_13980 | Not Available | + | 3260134 - 3260670 | 20447.8 |
| glycosyltransferase | DW921_13985 | Not Available | + | 3260675 - 3261625 | 36322.0 |
| hypothetical protein | DW921_13990 | Not Available | + | 3261633 - 3262181 | 20610.3 |
| hypothetical protein | DW921_13995 | Not Available | + | 3262132 - 3262845 | 26505.1 |
| manganese efflux pump | DW921_14000 | Not Available | + | 3262849 - 3263424 | 21298.7 |
| fad:protein fmn transferase | DW921_14005 | Not Available | + | 3263439 - 3264452 | 37762.4 |
| marc family protein | DW921_14010 | Not Available | - | 3264571 - 3265173 | 22004.0 |
| crp/fnr family transcriptional regulator | DW921_14015 | Not Available | + | 3265362 - 3266072 | 27136.8 |
| m3 family peptidase | DW921_14020 | Not Available | + | 3266082 - 3268118 | 78537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
