Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW921_13815 | Not Available | - | 3221143 - 3221697 | 21490.7 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW921_13820 | Not Available | - | 3221732 - 3222499 | 27722.5 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DW921_13825 | Not Available | - | 3222516 - 3223901 | 51355.4 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DW921_13830 | Not Available | - | 3223906 - 3224946 | 37131.5 |
| orotidine-5'-phosphate decarboxylase | DW921_13835 | Not Available | - | 3225214 - 3226038 | 31028.2 |
| peptide chain release factor 1 | DW921_13840 | Not Available | - | 3226080 - 3227189 | 41563.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | DW921_13845 | Not Available | - | 3227463 - 3228632 | 42800.3 |
| s-layer protein | DW921_13850 | Not Available | - | 3228716 - 3230398 | 64543.4 |
| ybjq family protein | DW921_13855 | Not Available | + | 3230488 - 3230808 | 11251.4 |
| hypothetical protein | DW921_13860 | Not Available | + | 3230830 - 3232074 | 45720.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
