Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprophilus strain AM42-38
Accession NumberQSFT00000000.1
Gene Summary
Adenine Count
960006 bp
Thymine Count
941783 bp
Guanine Count
792831 bp
Cytosine Count
797910 bp
Genome Length
3493311 bp
Protein-coding Genes
2820 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DW921_01285 | Not Available | - | 256969 - 257535 | 21980.5 |
| asma family protein | DW921_01290 | Not Available | - | 257764 - 260229 | 89464.8 |
| luxr family transcriptional regulator | DW921_01295 | Not Available | + | 260520 - 262175 | 64864.2 |
| hypothetical protein | DW921_01300 | Not Available | + | 262366 - 263001 | 23432.9 |
| port family protein | DW921_01305 | Not Available | + | 263081 - 263728 | 23922.6 |
| hypothetical protein | DW921_01310 | Not Available | - | 263808 - 264089 | 10802.3 |
| duf4250 domain-containing protein | DW921_01315 | Not Available | + | 264192 - 264368 | 6913.35 |
| purine permease | DW921_01320 | Not Available | - | 264463 - 265794 | 46329.8 |
| xanthine phosphoribosyltransferase | DW921_01325 | Not Available | - | 265813 - 266382 | 21130.0 |
| fimbrillin family protein | DW921_01330 | Not Available | - | 266616 - 267566 | 34613.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
